Divergence time and evolutionary rate estimation with multilocus data.

نویسندگان

  • Jeffrey L Thorne
  • Hirohisa Kishino
چکیده

Bayesian methods for estimating evolutionary divergence times are extended to multigene data sets, and a technique is described for detecting correlated changes in evolutionary rates among genes. Simulations are employed to explore the effect of multigene data on divergence time estimation, and the methodology is illustrated with a previously published data set representing diverse plant taxa. The fact that evolutionary rates and times are confounded when sequence data are compared is emphasized and the importance of fossil information for disentangling rates and times is stressed.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

A Note on Evolutionary Rate Estimation in Bayesian Evolutionary Analysis: Focus on Pathogens

Bayesian evolutionary analysis provide a statistically sound and flexible framework for estimation of evolutionary parameters. In this method, posterior estimates of evolutionary rate (μ) are derived by combining evolutionary information in the data with researcher’s prior knowledge about the true value of μ. Nucleotide sequence samples of fast evolving pathogens that are taken at d...

متن کامل

Dating divergence of Polystigma and other Sordariomycetes

Studies on the evolutionary history of ascomycetes in terms of time scale will help to understand historical patterns that shape their biodiversity. Until now most of dating studies of ascomycetes have focused on major events in fungal evolution but not on divergence events within smaller groups of fungi e.g. within Sordariomycetes. We used molecular dating to estimate the time of separation of...

متن کامل

Divergence times and morphological evolution of the subtribe Eritrichiinae (Boraginaceae-Rochelieae) with special reference to Lappula

The subtribe Eritrichiinae belongs to tribe Rochelieae (Borginaceae; Cynoglossoideae) which is composed of about 200 species in five genera including Eritrichium, Lappula, Hackelia, Lepechiniella, and Rochelia. The majority of the species are annual and grow in xeric habitats. The genus Lappula as an arid adapted and the second biggest genus...

متن کامل

Determination of constant coefficients of Bourgoyne and Young drilling rate model using a novel evolutionary algorithm

Achieving minimum cost and time in reservoir drilling requires evaluating the effects of the drilling parameters on the penetration rate and constructing a drilling rate estimator model. Several drilling rate models have been presented using the drilling parameters. Among these, the Bourgoyne and Young (BY) model is widely utilized in order to estimate the penetration rate. This model relates s...

متن کامل

Robust Estimation in Linear Regression Model: the Density Power Divergence Approach

The minimum density power divergence method provides a robust estimate in the face of a situation where the dataset includes a number of outlier data. In this study, we introduce and use a robust minimum density power divergence estimator to estimate the parameters of the linear regression model and then with some numerical examples of linear regression model, we show the robustness of this est...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:
  • Systematic biology

دوره 51 5  شماره 

صفحات  -

تاریخ انتشار 2002